STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g054186Nuclear transcription factor Y subunit B-6-like protein. (134 aa)    
Predicted Functional Partners:
L195_g034846
Nuclear transcription factor Y subunit A-7.
  
 0.886
L195_g011449
Nuclear transcription factor Y subunit C-9-like protein.
  
 0.868
L195_g039007
Nuclear transcription factor Y subunit A-9-like protein.
  
 0.867
L195_g014281
Nuclear transcription factor Y subunit A-1-like protein.
  
 0.865
L195_g041996
Heme activated protein 5c.
   
 0.836
L195_g008567
Nuclear transcription factor Y subunit A-3-like protein.
  
 0.833
L195_g021067
Nuclear transcription factor Y subunit A-3.
   
 0.822
L195_g059645
Nuclear transcription factor Y subunit C-9-like protein.
  
 0.810
L195_g031406
Nuclear transcription factor Y subunit C-3-like protein.
  
 0.809
L195_g041331
Nuclear transcription factor Y subunit C-9-like protein.
  
 0.808
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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