STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g054189Mitotic checkpoint protein BUB3. (82 aa)    
Predicted Functional Partners:
L195_g018123
Mitotic spindle checkpoint protein MAD2-like.
   
 0.993
L195_g022513
Anaphase-promoting complex subunit 4-like protein.
    
 0.968
L195_g009855
Anaphase-promoting complex subunit 4-like protein.
    
 0.968
L195_g010277
Anaphase-promoting complex subunit 4-like protein.
    
 0.968
L195_g009457
Zinc finger protein.
   
 
 0.959
L195_g003011
Mitotic spindle assembly checkpoint protein MAD1-like.
    
 0.957
L195_g056020
Anaphase-promoting complex subunit 5.
    
 0.921
L195_g003477
Anaphase-promoting complex subunit 5-like protein.
    
 0.921
L195_g016895
Anaphase-promoting complex subunit 6-like protein.
    
 0.919
L195_g001038
Anaphase-promoting complex subunit 6-like protein.
    
 0.919
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.