STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g054300WD repeat domain phosphoinositide-interacting protein 3-like. (124 aa)    
Predicted Functional Partners:
L195_g017685
Autophagy-related protein 18-like.
   
 0.597
L195_g026019
Autophagy-related protein 18-like.
   
 0.597
L195_g003214
Autophagy-related protein.
    
 
 0.578
L195_g014095
Autophagy-related protein.
    
 
 0.578
L195_g014647
Autophagy-related protein 2 b.
    
 
 0.578
L195_g003364
Beclin 1 protein.
    
 
 0.550
L195_g051136
Zinc ion binding protein.
      
 0.454
L195_g056104
PB1-Joka2 domain protein.
      
 0.454
L195_g033188
Zinc ion binding protein.
      
 0.454
L195_g024119
Autophagy substrate nbr1.
      
 0.454
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.