STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g062385Pleiotropic drug resistance protein 1-like. (45 aa)    
Predicted Functional Partners:
L195_g028207
Cytochrome c oxidase assembly protein cox15-like protein.
    
 0.575
L195_g031174
Cytochrome c oxidase assembly protein cox15-like protein.
    
 0.575
L195_g027478
Pleiotropic drug resistance protein 1-like.
  
     0.542
L195_g014266
CAAX amino terminal protease family protein.
  
 
 0.535
L195_g026663
CAAX amino terminal protease family protein.
  
 
 0.535
L195_g014461
CAAX amino terminal protease family protein.
  
 
 0.535
L195_g051019
Nucleobase-ascorbate transporter 6-like protein.
  
     0.520
L195_g039335
Lysine/histidine transporter 5-like protein.
  
 
   0.503
L195_g020013
Pleiotropic drug resistance protein.
  
     0.502
L195_g048876
Lysine/histidine transporter 1-like protein.
  
 
   0.500
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.