STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g029732Serine/threonine-protein kinase nek2-like protein. (346 aa)    
Predicted Functional Partners:
L195_g002051
Uncharacterized protein.
  
  
  0.584
L195_g037424
Uncharacterized protein.
  
  
  0.560
L195_g011520
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.548
L195_g026290
Uncharacterized protein.
  
  
  0.540
L195_g043855
OVATE domain-containing protein.
  
     0.526
L195_g002635
C2H2 zinc finger protein.
  
  
  0.526
L195_g000329
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.514
L195_g048493
Putative serine threonine-protein kinase.
  
 
   0.512
L195_g022020
BTB/POZ domain-containing protein.
  
     0.512
L195_g018615
AT-rich interactive domain-containing protein 2.
  
  
  0.508
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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