STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g040905Bark agglutinin lecrpa3-like protein; Belongs to the leguminous lectin family. (253 aa)    
Predicted Functional Partners:
L195_g054943
Linoleate 9S-lipoxygenase.
  
 
   0.560
L195_g025904
Methyltransferase.
  
 
  0.551
L195_g018870
Protein phosphatase 2C and cyclic nucleotide-binding kinase domain-containing.
    
  0.548
L195_g022345
Protein phosphatase 2C and cyclic nucleotide-binding kinase domain-containing.
    
  0.548
L195_g002144
1-acyl-sn-glycerol-3-phosphate acyltransferase chloroplastic-like.
    
  0.536
L195_g041961
Kinesin light chain.
  
 
   0.527
L195_g000756
3-deoxy-d-manno-octulosonic-acid transferase.
    
  0.524
L195_g030537
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  0.523
L195_g040987
Kinesin light chain.
  
 
   0.523
L195_g051283
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  0.521
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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