STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g021843ATP-dependent DNA helicase; Belongs to the helicase family. (467 aa)    
Predicted Functional Partners:
L195_g001263
Histone chaperone ASF1B.
   
 
 0.480
L195_g032569
ATP-dependent DNA helicase PIF1.
  
     0.452
L195_g002724
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 
 0.447
L195_g021104
ATP-dependent DNA helicase PIF1.
  
     0.446
L195_g014541
ATP-dependent DNA helicase PIF1.
  
     0.445
L195_g047486
ATP-dependent DNA helicase PIF1.
  
     0.444
L195_g049789
ATP-dependent DNA helicase PIF1.
  
     0.442
L195_g036343
ATP-dependent DNA helicase PIF1.
  
     0.442
L195_g034328
Helicase-like protein.
  
     0.434
L195_g053666
ATP-dependent DNA helicase PIF1.
  
     0.433
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
Server load: low (18%) [HD]