STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g023985Secologanin synthase-like protein; Belongs to the cytochrome P450 family. (249 aa)    
Predicted Functional Partners:
L195_g012300
ENT domain-containing protein.
   
 0.897
L195_g014306
Violaxanthin de-epoxidase chloroplastic-like; Belongs to the calycin superfamily. Lipocalin family.
     
 0.863
L195_g034746
Nitrate reductase.
    
 0.840
L195_g037828
Nitrate reductase.
    
 0.840
L195_g010333
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.840
L195_g011178
Nitrate reductase.
    
 0.840
L195_g005951
Carotene epsilon-monooxygenase chloroplastic-like; Belongs to the cytochrome P450 family.
  
 
 
0.832
L195_g019828
Cytochrome p450 734a1-like protein; Belongs to the cytochrome P450 family.
  
  
 
0.819
L195_g017900
5-adenylylsulfate reductase chloroplastic-like.
    
  0.794
L195_g023534
5-adenylylsulfate reductase chloroplastic-like.
    
  0.794
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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