STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g024097Disease resistance protein rga3-like; Belongs to the disease resistance NB-LRR family. (251 aa)    
Predicted Functional Partners:
L195_g038749
Uncharacterized protein.
  
    0.546
L195_g045253
Microtubule-associated protein MAP65-3-like.
  
   0.546
L195_g060795
Glutathione S-transferase-like protein.
  
 
   0.505
L195_g004926
ENT domain-containing protein.
  
     0.501
L195_g020453
Receptor-like protein kinase.
  
 
   0.495
L195_g010202
Uncharacterized protein.
  
     0.493
L195_g044994
C2 domain containing protein.
  
     0.488
L195_g056934
Disease resistance rpp13-like protein 1-like.
  
     0.482
L195_g015992
Uncharacterized protein.
  
     0.478
L195_g027188
Cysteine-rich repeat secretory protein 38-like protein.
  
 
   0.476
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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