STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g000051Putative mannitol dehydrogenase-like protein. (362 aa)    
Predicted Functional Partners:
L195_g005255
tRNA wybutosine-synthesizing protein 2/3/4-like.
    
  0.737
L195_g020253
Xylulose kinase-like protein.
  
 
 0.729
L195_g034002
Peroxidase 55-like protein; Belongs to the peroxidase family.
    
 0.694
L195_g029225
Acetolactate synthase.
    
 0.690
L195_g017113
2-hydroxyacyl-CoA lyase; Belongs to the TPP enzyme family.
    
 0.690
L195_g003628
Acetolactate synthase.
    
 0.690
L195_g025774
1-cys peroxiredoxin-like protein.
     
 0.684
L195_g035287
Cinnamyl alcohol dehydrogenase-like protein.
  
  
 
0.675
L195_g029462
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
  0.671
L195_g022047
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.
    
  0.671
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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