STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g001374Outer envelope protein of 80 chloroplastic-like. (350 aa)    
Predicted Functional Partners:
L195_g007902
Mitochondrial import receptor subunit TOM40-1-like protein.
    
 0.964
metaxin-1
Metaxin-1.
   
 0.954
metaxin-1-2
Metaxin-1.
   
 0.954
metaxin-2
Metaxin-2.
   
 0.954
L195_g034895
Mitochondrial import receptor subunit TOM22 2-like protein.
   
 0.860
L195_g024173
Mitochondrial import receptor subunit TOM22 2-like protein.
   
 0.860
L195_g002018
UDP-N-acetylglucosamine acyltransferase.
  
  
 0.727
L195_g033695
Peptidase M50 family.
 
  
 0.713
L195_g029545
E3 ubiquitin-protein ligase rnf170-like protein.
   
 0.687
L195_g004072
Mitochondrial inner membrane organizing system protein 1-like.
   
 0.687
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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