STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g002141Beach domain-containing protein lvsa-like. (351 aa)    
Predicted Functional Partners:
L195_g006865
Vacuolar sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
   
 
  0.955
L195_g030648
Uncharacterized protein.
   
 
 0.945
L195_g051920
Uncharacterized protein.
     
 0.886
L195_g061573
Uncharacterized protein.
     
 0.886
L195_g054968
Eh domain-containing protein 1-like.
     
 0.886
L195_g056349
Eh domain-containing protein 1-like.
     
 0.886
L195_g056478
Eh domain-containing protein 1-like.
     
 0.886
L195_g030787
Eh domain-containing protein 1-like.
     
 0.886
L195_g034717
Eh domain-containing protein 1-like.
     
 0.886
L195_g042378
Eh domain-containing protein 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.886
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.