STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g009166E3 ubiquitin-protein ligase orthrus 2-like protein. (677 aa)    
Predicted Functional Partners:
L195_g030875
Chromatin structure-remodeling complex protein SYD.
    
 0.673
L195_g021399
Chromatin structure-remodeling complex protein SYD.
    
 0.673
L195_g003096
Chromatin structure-remodeling complex protein SYD.
    
 0.673
L195_g009512
Chromatin structure-remodeling complex protein SYD.
    
 0.673
L195_g035268
Histone-lysine N-methyltransferase SUVR5-like protein.
    
 0.586
L195_g036666
Histone-lysine N-methyltransferase SUVR5-like protein.
    
 0.586
L195_g001763
Histone-lysine N-methyltransferase SUVR5-like protein.
    
 0.586
L195_g003115
Uncharacterized protein.
    
 0.586
L195_g020116
Tubulin beta-2a chain-like protein.
    
 0.582
L195_g014368
DUF1421 domain-containing protein.
    
 0.555
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.