STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g00965433 kDa ribonucleoprotein chloroplastic-like. (268 aa)    
Predicted Functional Partners:
L195_g002094
Serine/arginine rich-like protein SR45a.
  
 
  0.738
L195_g007177
Cleavage stimulation factor subunit 2 tau variant-like protein.
  
 
 0.700
L195_g002307
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
  
 0.675
L195_g018288
Heterogeneous nuclear ribonucleoprotein d-like.
  
 
 0.672
L195_g018285
Heterogeneous nuclear ribonucleoprotein d-like.
  
 
 0.669
L195_g026326
RNA-binding protein 28-like.
  
   0.657
L195_g030724
Eukaryotic translation initiation factor 3 subunit g-like protein.
  
 0.655
L195_g006037
Polyadenylate-binding protein 2-like.
  
 
  0.638
L195_g016979
50S ribosomal protein chloroplastic-like.
   
 
 0.615
L195_g006664
Zinc finger CCCH domain-containing protein 25-like.
  
 
   0.614
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
Server load: low (24%) [HD]