STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L195_g014801Gibberellin 2-beta-dioxygenase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (344 aa)    
Predicted Functional Partners:
L195_g015924
Gibberellin 3-beta-dioxygenase 1-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.906
L195_g021000
Gibberellin 20 oxidase 2-like protein.
  
  
0.862
L195_g000974
Acyl-activating enzyme 19-like protein.
     
 0.564
L195_g000973
Acyl-activating enzyme 19-like protein.
     
 0.564
L195_g024032
Putative iron/ascorbate oxidoreductase.
  
     0.522
L195_g000684
Putative iron/ascorbate oxidoreductase.
  
     0.511
L195_g015472
1-aminocyclopropane-1-carboxylate oxidase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.507
L195_g052948
1-aminocyclopropane-1-carboxylate oxidase 1-like protein.
  
     0.496
L195_g050853
Protein SRG1-like.
  
     0.494
L195_g001826
Gibberellin 2-beta-dioxygenase 2-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.492
Your Current Organism:
Trifolium pratense
NCBI taxonomy Id: 57577
Other names: T. pratense, Trifolium pratense L., peavine clover, purple clover, red clover, rotklee
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