STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_0331MSHA biogenesis protein MshE. (574 aa)    
Predicted Functional Partners:
VS_0332
MSHA biogenesis protein MshG.
 
 
 0.988
pilC
Type IV pilin assembly protein pilC; Function of homologous gene experimentally demonstrated in another organism; putative transporter.
 
 
 0.959
VS_0137
Type II secretory pathway, component EpsF.
 
 
 0.955
VS_0334
MSHA pilin protein MshB.
 
 0.954
VS_0335
MSHA pilin protein MshA.
 
 0.944
VS_0143
Type II secretory pathway, component EpsL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.935
VS_0337
MSHA pilin protein MshD.
 
 0.910
VS_0336
MSHA pilin protein MshC.
  
 0.896
pilD
Type IV prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.872
VS_0328
MSHA biogenesis protein MshL.
 
  
 0.863
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.