STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_0671Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
VS_II1333
Putative transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.758
VS_II0164
Transcriptional regulators, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.748
VS_1641
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.733
VS_2185
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.728
VS_II0426
Glycine cleavage system transcriptional activator (Gcv operon activator); Belongs to the LysR transcriptional regulatory family.
  
     0.725
VS_II1338
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.723
VS_1537
Hypothetical protein; No homology to any previously reported sequences; Belongs to the LysR transcriptional regulatory family.
  
     0.720
VS_0886
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.718
VS_II0452
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.715
VS_II1365
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.715
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.