Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
VS_1237Aldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in another organism; enzyme; Belongs to the aldehyde dehydrogenase family. (499 aa)    
Predicted Functional Partners:
VS_1947
Diaminobutyrate--2-oxoglutarate aminotransferase.
  
 0.821
gltB
Glutamate synthase, large subunit.
  
 
 0.811
VS_0472
Putative glutamate synthase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.811
VS_0474
Glutamate synthase [NADPH] large chain.
  
 
 0.811
VS_1236
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
    
  0.790
VS_0997
Phosphate acetyltransferase.
    
 0.770
VS_1891
Cytochrome P450; Function of homologous gene experimentally demonstrated in another organism; structure; Belongs to the cytochrome P450 family.
  
 0.766
gcvP
Glycine dehydrogenase (Glycine cleavage system P-protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.755
VS_II0019
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 0.752
VS_1797
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.751
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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