STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_1331Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (492 aa)    
Predicted Functional Partners:
VS_1332
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 0.999
VS_II0997
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.996
VS_1328
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.973
VS_1334
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.969
VS_1326
Putative protein disaggregation chaperone (clpB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the ClpA/ClpB family.
 
 0.967
VS_1333
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.965
VS_1319
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.960
VS_1327
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.960
VS_1318
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.952
VS_1320
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.947
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.