STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_1995Peptide transport system permease protein sapC. (295 aa)    
Predicted Functional Partners:
VS_1993
Peptide transport periplasmic protein sapA precursor.
  
 0.997
VS_1994
Peptide transport system permease protein sapB.
 
 0.997
VS_1997
Peptide transport system ATP-binding protein sapF.
 
 0.994
VS_1996
Peptide transport system ATP-binding protein sapD; Belongs to the ABC transporter superfamily.
  
 0.983
VS_2509
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
  
  0.970
VS_0993
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
  
  0.936
VS_0994
Oligopeptide transport ATP-binding protein oppF; Belongs to the ABC transporter superfamily.
  
  0.925
VS_II1529
ABC systems: ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.919
VS_0074
Hypothetical ABC transporter ATP-binding protein.
  
  0.917
VS_II1528
ABC systems: ATP binding protein.
  
  0.916
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.