Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VS_2000Hypothetical protein. (129 aa)    
Predicted Functional Partners:
VS_2001
Manganese-dependent inorganic pyrophosphatase.
       0.739
VS_II1405
Conserved hypothetical protein.
  
     0.667
VS_0145
General secretion pathway protein N.
  
     0.546
VS_0144
General secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.524
VS_II0112
Conserved hypothetical protein.
  
     0.514
VS_II0807
CreA protein.
  
     0.509
VS_II0254
Hypothetical protein.
  
     0.506
VS_3032
Putative phosphatase.
  
    0.503
VS_0862
Hypothetical protein.
  
     0.489
VS_0139
Type II secretory pathway, pseudopilin EpsH.
  
     0.484
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.