VS_2011 protein (Vibrio tasmaniensis) - STRING interaction network

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Score

VS_2011

Nucleoside-diphosphate-sugar epimerase. (284 aa)

Predicted Functional Partners:

rpsS

0.873

VS_2012

0.871

rpsC

0.852

rpsQ

0.841

VS_II0389

0.831

rplN

0.826

rpsN

0.823

rpsL

0.823

rpsE

0.821

rplD

0.819

Your Current Organism:

Vibrio tasmaniensis

NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VS_2011	VS_2012	VS_2011	VS_2012	Nucleoside-diphosphate-sugar epimerase.	Hypothetical protein.	0.871
VS_2011	VS_II0389	VS_2011	VS_II0389	Nucleoside-diphosphate-sugar epimerase.	Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.831
VS_2011	rplD	VS_2011	VS_2831	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.819
VS_2011	rplN	VS_2011	VS_2821	Nucleoside-diphosphate-sugar epimerase.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.826
VS_2011	rpsC	VS_2011	VS_2825	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.852
VS_2011	rpsE	VS_2011	VS_2814	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.821
VS_2011	rpsL	VS_2011	VS_2837	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.823
VS_2011	rpsN	VS_2011	VS_2818	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.823
VS_2011	rpsQ	VS_2011	VS_2822	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.841
VS_2011	rpsS	VS_2011	VS_2828	Nucleoside-diphosphate-sugar epimerase.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.873
VS_2012	VS_2011	VS_2012	VS_2011	Hypothetical protein.	Nucleoside-diphosphate-sugar epimerase.	0.871
VS_II0389	VS_2011	VS_II0389	VS_2011	Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.	Nucleoside-diphosphate-sugar epimerase.	0.831
rplD	VS_2011	VS_2831	VS_2011	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Nucleoside-diphosphate-sugar epimerase.	0.819
rplD	rplN	VS_2831	VS_2821	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplD	rpsC	VS_2831	VS_2825	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplD	rpsE	VS_2831	VS_2814	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.999
rplD	rpsL	VS_2831	VS_2837	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rplD	rpsN	VS_2831	VS_2818	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rplD	rpsQ	VS_2831	VS_2822	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplD	rpsS	VS_2831	VS_2828	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999