STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_2468Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (153 aa)    
Predicted Functional Partners:
VS_2469
Similar to DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
    0.811
argH
Bifunctional protein argH; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
    
 0.734
VS_1947
Diaminobutyrate--2-oxoglutarate aminotransferase.
    
 0.726
argA
Amino-acid acetyltransferase.
    
 0.699
VS_2225
Hypothetical M22 peptidase homolog yeaZ.
 
 
 0.591
VS_2470
Predicted acetyltransferase.
  
  
 0.579
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
  
    0.543
VS_2471
Similar to putative lipid carrier protein.
       0.537
VS_II0447
5'-nucleotidase (Nucleoside 5'-monophosphatephosphohydrolase).
  
    0.486
VS_II1112
Response regulator.
    
   0.479
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.