STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_2785Hypothetical protein. (302 aa)    
Predicted Functional Partners:
VS_2051
Hypothetical protein.
  
     0.774
VS_2457
Conserved hypothetical protein.
  
     0.774
VS_0848
Hypothetical protein.
  
     0.773
VS_2068
Conserved hypothetical protein.
  
     0.773
VS_0934
Hypothetical protein.
  
     0.768
VS_0276
Sodium-type polar flagellar protein motX.
  
     0.767
VS_2323
Conserved hypothetical protein.
  
     0.767
VS_0115
Putative ATPase involved in DNA repair.
  
     0.765
VS_0793
Hypothetical protein.
  
     0.765
VS_0792
Hypothetical protein.
  
     0.764
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.