Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VS_1027 | VS_2920 | VS_1027 | VS_2920 | 4-amino-4-deoxychorismate lyase. | FxsA protein. | 0.672 |
VS_1027 | leuA | VS_1027 | VS_0380 | 4-amino-4-deoxychorismate lyase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.932 |
VS_2110 | VS_2920 | VS_2110 | VS_2920 | Conserved hypothetical protein. | FxsA protein. | 0.627 |
VS_2280 | VS_2920 | VS_2280 | VS_2920 | Protein ybbN. | FxsA protein. | 0.723 |
VS_2280 | hslV | VS_2280 | VS_2901 | Protein ybbN. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.847 |
VS_2569 | VS_2920 | VS_2569 | VS_2920 | Oxaloacetate decarboxylase alpha chain. | FxsA protein. | 0.808 |
VS_2569 | accA | VS_2569 | VS_2336 | Oxaloacetate decarboxylase alpha chain. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.989 |
VS_2569 | accD | VS_2569 | VS_0904 | Oxaloacetate decarboxylase alpha chain. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.995 |
VS_2569 | leuA | VS_2569 | VS_0380 | Oxaloacetate decarboxylase alpha chain. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.841 |
VS_2569 | leuD | VS_2569 | VS_0377 | Oxaloacetate decarboxylase alpha chain. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.866 |
VS_2920 | VS_1027 | VS_2920 | VS_1027 | FxsA protein. | 4-amino-4-deoxychorismate lyase. | 0.672 |
VS_2920 | VS_2110 | VS_2920 | VS_2110 | FxsA protein. | Conserved hypothetical protein. | 0.627 |
VS_2920 | VS_2280 | VS_2920 | VS_2280 | FxsA protein. | Protein ybbN. | 0.723 |
VS_2920 | VS_2569 | VS_2920 | VS_2569 | FxsA protein. | Oxaloacetate decarboxylase alpha chain. | 0.808 |
VS_2920 | VS_II0928 | VS_2920 | VS_II0928 | FxsA protein. | Putative metal-dependent hydrolases. | 0.627 |
VS_2920 | accA | VS_2920 | VS_2336 | FxsA protein. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.708 |
VS_2920 | accD | VS_2920 | VS_0904 | FxsA protein. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.708 |
VS_2920 | hslV | VS_2920 | VS_2901 | FxsA protein. | ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.724 |
VS_2920 | leuA | VS_2920 | VS_0380 | FxsA protein. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.705 |
VS_2920 | leuD | VS_2920 | VS_0377 | FxsA protein. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.705 |
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