STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_3035Hypothetical protein. (406 aa)    
Predicted Functional Partners:
VS_3036
Homoserine/homoserine lactone efflux protein.
       0.654
VS_3034
Transcriptional regulator.
       0.552
VS_0825
Flagellar assembly protein fliH.
  
     0.521
VS_3037
Lysophospholipase.
       0.493
VS_0805
Flagellar basal-body rod protein flgF; Belongs to the flagella basal body rod proteins family.
 
     0.442
VS_0823
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
     0.428
VS_0838
Flagellar biosynthesis protein flhF.
 
     0.416
VS_3033
Glyceraldehyde-3-phosphate dehydrogenase 3; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.413
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.