STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_3051Adenylate cyclase. (842 aa)    
Predicted Functional Partners:
VS_2855
cAMP-binding proteins.
  
  
 0.937
cpdA
Cyclic AMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
  
 0.853
VS_0165
Putative PTS system, maltose and glucose-specific IIABC components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.803
VS_1032
PTS system, glucose-specific IIBC component.
     
 0.803
VS_2186
Putative PTS permease for N-acetylglucosamine and glucose.
     
 0.803
VS_2260
PTS system N-acetylglucosamine-specific EIICBA component.
     
 0.803
VS_2378
PTS system trehalose-specific EIIBC component.
     
 0.803
VS_2649
PTS system glucose-specific EIICBA component.
     
 0.803
VS_II1470
Putative PTS permease for N-acetylglucosamine and glucose.
     
 0.803
lapA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
   
 0.767
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.