STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_II0026ABC transporters: Transmembrane and ATP-binding protein. (616 aa)    
Predicted Functional Partners:
pstB
ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.697
VS_2535
Hypothetical ABC transporter ATP-binding protein.
  
0.648
VS_II1188
Hypothetical ABC transporter ATP-binding protein.
   
 0.648
VS_2215
PfaA, omega-3 polyunsaturated fatty acid synthase.
   
 0.647
VS_II1384
Hypothetical protein.
    
  0.646
VS_II0005
ABC transporter IM-ABC: Transmembrane and ATP binding protein.
   
 
0.535
VS_II0509
ABC transporter: Transmembrane and ATP-binding protein.
  
  0.535
VS_II0510
ABC transporter: Transmembrane and ATP-binding protein.
   
 
0.535
VS_II0861
ABC transporter, transmembrane protein-ATP-binding protein (IM, ABC).
   
 
0.535
VS_II0862
ABC transporter (IM-ABC).
   
  0.535
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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