Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VS_II0220ABC transporter: Substrate-binding protein precursor; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. (394 aa)    
Predicted Functional Partners:
VS_II0222
ABC transporter: Transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter.
 
 0.998
VS_II0221
ABC transporter: Transmembrane protein; Function of homologous gene experimentally demonstrated in another organism; transporter.
 
 0.996
malK
ABC transporter: ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
 
 0.993
VS_2591
Maltodextrin transport system permease protein malC.
 
 0.990
VS_2586
ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.960
VS_0878
ABC transporter: ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.953
ugpC
ABC-type sugar transport systems, ATPase components; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
 0.953
VS_II1387
ABC-type sugar transport system, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.953
VS_II0159
Maltose operon periplasmic protein precursor.
 
  
 0.924
VS_II1390
ABC transporter: permease component.
 
 0.915
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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