Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
VS_II0480Putative Flp pilus assembly protein TadG. (438 aa)    
Predicted Functional Partners:
VS_II0473
Putative Flp pilus assembly protein TadZ.
  
    0.892
VS_II0475
Putative Flp pilus assembly protein TadB.
  
  
 0.886
VS_II0476
Putative Flp pilus assembly protein TadC.
  
    0.884
VS_II0474
Putative Flp pilus assembly protein TadA.
  
    0.867
VS_II0471
Flp pilus assembly protein; Belongs to the bacterial secretin family.
  
  
 0.817
VS_II0470
Conserved hypothetical protein.
       0.807
VS_II0472
Conserved hypothetical protein.
       0.807
VS_II0477
Putative Flp pilus assembly protein TadD.
     
 0.788
VS_II0479
Putative Flp pilus assembly protein TadF.
     
 0.788
VS_II0478
Putative Flp pilus assembly protein TadE.
       0.787
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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