Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VS_II0691ABC transporter: ATP-binding protein. (244 aa)    
Predicted Functional Partners:
VS_II0692
ABC transporter: Transmembrane protein (IM).
 
 0.999
VS_II0690
ABC transporter: substrate binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.998
VS_2239
znuB, High-affinity zinc uptake system membrane protein.
 
 0.996
VS_2237
High-affinity zinc uptake system protein znuA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.991
VS_II0693
ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
 
 0.991
znuC
znuC, High-affinity zinc uptake system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 
0.920
VS_II0688
Hypothetical protein.
 
    0.915
VS_II0689
Conserved hypothetical protein.
  
    0.848
VS_2781
Hypothetical protein.
  
 
 0.754
fur
Putative zinc uptake regulation protein; Belongs to the Fur family.
  
  
 0.739
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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