STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_II0874Conserved hypothetical protein. (355 aa)    
Predicted Functional Partners:
VS_II0877
MoxR-like ATPase.
 
 
 0.960
VS_II0876
Conserved hypothetical protein.
 
  
 0.956
VS_II0872
Conserved hypothetical protein.
 
   
 0.947
VS_II0873
Conserved hypothetical protein.
   
0.902
VS_II0215
Putative MoxR-ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.847
VS_II0214
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.817
VS_II0211
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.792
VS_II0875
Conserved hypothetical protein.
       0.787
VS_1341
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
  0.740
VS_II0274
Flavodoxin reductase family 1 protein.
   
 
  0.727
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.