STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VS_II1111Hypothetical protein. (145 aa)    
Predicted Functional Partners:
VS_II1112
Response regulator.
 
    0.952
VS_1315
Putative two-component regulatory system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.919
VS_2949
Putative sensory box/GGDEF family protein.
 
      0.879
VS_0477
Aerobic respiration control sensor protein ArcB.
  
 0.873
VS_2614
Sensor protein barA.
  
 
 0.813
VS_0964
Sensory box histidine kinase/response regulator.
  
 0.807
VS_1155
Sensory box histidine kinase/response regulator.
  
 0.807
VS_2863
Hypothetical protein.
  
 0.796
VS_II1184
Hypothetical protein.
  
 0.782
VS_0846
Conserved hypothetical protein.
  
  
  0.779
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.