Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VS_II1399Fe-S oxidoreductase. (951 aa)    
Predicted Functional Partners:
VS_II1398
L-lactate dehydrogenase.
  
 0.989
VS_1488
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.978
gltB
Glutamate synthase, large subunit.
    
 0.968
VS_0472
Putative glutamate synthase precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.968
VS_0474
Glutamate synthase [NADPH] large chain.
    
 0.968
VS_0997
Phosphate acetyltransferase.
    
 0.964
VS_0388
Acetolactate synthase isozyme III large subunit.
   
 0.946
VS_3143
Acetolactate synthase isozyme II large subunit.
   
 0.946
VS_II0150
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.941
VS_II0365
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.941
Your Current Organism:
Vibrio tasmaniensis
NCBI taxonomy Id: 575788
Other names: V. tasmaniensis LGP32, Vibrio lentus MEL32, Vibrio splendidus LGP32, Vibrio tasmaniensis LGP32
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