STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
2.t00004Ubiquitin carboxyl-terminal hydrolase domain containing protein. (444 aa)    
Predicted Functional Partners:
89.t00016
Splicing factor Prp8, putative.
   
 0.972
51.t00011
Pre-mRNA splicing factor, putative.
    
 0.968
153.t00011
Uncharacterized protein.
    
 0.967
EHI_021380
U5 small nuclear ribonucleoprotein subunit, putative.
   
 0.965
8.t00008
U5 small nuclear ribonucleoprotein subunit, putative.
   
 0.965
201.t00013
DEAD/DEAH box helicase, putative; Belongs to the DEAD box helicase family.
 
 
 0.959
169.t00007
Protein kinase, putative; Belongs to the protein kinase superfamily.
    
   0.924
48.t00017
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.862
392.t00003
LSM domain containing protein.
    
  0.846
170.t00019
Small nuclear ribonucleoprotein Sm D2.
    
 0.845
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.