STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
303.t00006Erf4 domain-containing protein. (126 aa)    
Predicted Functional Partners:
EHI_048840
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
1.t00143
Uncharacterized protein.
   
 0.608
4.t00031
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
178.t00004
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
34.t00023
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
67.t00011
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
264.t00005
Uncharacterized protein.
   
 0.608
264.t00007
Uncharacterized protein.
   
 0.608
80.t00026
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.608
6.t00099
Serine palmitoyltransferase, putative.
     
  0.540
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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