STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
3.t00061RNA recognition motif domain containing protein. (311 aa)    
Predicted Functional Partners:
200.t00017
Heat shock transcription factor, putative.
   
 
 0.689
205.t00014
RNA recognition motif domain containing protein.
   
 0.675
105.t00004
RNA recognition motif domain containing protein.
    
0.674
EHI_153810
RNA recognition motif domain containing protein.
   
 0.657
13.t00017
U1 small nuclear ribonucleoprotein subunit, putative.
   
 0.657
392.t00003
LSM domain containing protein.
   
 
  0.599
74.t00043
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.576
77.t00007
WD domain containing protein.
   
 
 0.575
243.t00007
Small nuclear ribonucleoprotein G.
   
 
 0.567
194.t00015
Splicing factor3B subunit 2, putative.
   
 
 0.563
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.