STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
204.t00006Seryl-tRNA synthetase, putative. (453 aa)    
Predicted Functional Partners:
206.t00014
Valyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.945
EHI_092930
tRNA-binding domain-containing protein.
  
  
 0.904
102.t00015
Methionyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.904
9.t00054
Glycyl-tRNA synthetase, putative.
   
  
 0.871
209.t00002
Lysine--tRNA ligase.
  
 
 0.849
159.t00014
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.828
144.t00016
Prolyl-tRNA synthetase, putative.
  
 
 0.793
237.t00005
Tyrosyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.787
162.t00003
DNA-directed RNA polymerase II subunit, putative.
  
  
 0.781
31.t00004
Toxin resistance protein, putative.
     
 0.779
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.