STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
300.t00004COP9 signalosome complex subunit 3, putative. (389 aa)    
Predicted Functional Partners:
10.t00056
Uncharacterized protein.
   
 0.999
61.t00026
COP9 signalosome subunit, putative.
   
 0.999
86.t00015
PCI domain containing protein.
   
 0.999
fus6
COP9 signalosome complex subunit 1, putative.
   
 0.999
130.t00003
Cullin, putative; Belongs to the cullin family.
   
  0.966
300.t00010
Ubiquitin-like, putative.
    
 0.946
1.t00141
Cullin, putative; Belongs to the cullin family.
    
 0.931
EHI_087430
SWIRM domain-containing protein.
   
 0.872
463.t00007
SWIRM domain protein.
   
 0.872
169.t00015
SWIRM domain protein.
   
 0.872
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.