STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
294.t00008Acetyltransferase, GNAT family. (183 aa)    
Predicted Functional Partners:
171.t00011
Acetyltransferase, GNAT family.
   
 0.829
37.t00032
Uncharacterized protein.
    
 0.713
259.t00002
Uncharacterized protein.
   
 
 0.701
241.t00008
Acetyltransferase, GNAT family.
   
 
0.701
228.t00012
Uncharacterized protein.
   
 
 0.678
400.t00006
Uncharacterized protein.
   
 
 0.676
64.t00030
Acetyltransferase, GNAT family.
   
 
0.653
53.t00027
Uncharacterized protein.
   
 
 0.649
345.t00010
Acetyltransferase, GNAT family.
   
 
 0.646
28.t00013
Ribosomal protein L23A, putative; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.561
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.