STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
117.t00040DNA excision repair protein, putative. (238 aa)    
Predicted Functional Partners:
1.t00124
DNA repair endonuclease, putative.
   
 0.999
30.t00038
Uncharacterized protein.
   
 0.966
9.t00022
Nuclear transport factor 2, putative.
   
 0.948
159.t00005
Asparaginyl-tRNA synthetase, putative.
   
 0.934
281.t00001
DNA repair helicase, putative.
   
 
 0.916
40.t00010
DNA repair helicase, putative.
     
 0.913
100.t00007
Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family.
   
 0.903
139.t00016
MutS family protein.
   
 0.892
8.t00042
DNA polymerase.
   
 0.887
113.t00021
DNA mismatch repair protein Msh2, putative.
   
 0.880
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.