STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
48.t00019Zinc finger protein containing CCHC type domain. (164 aa)    
Predicted Functional Partners:
131.t00001
DEAD/DEAH box helicase, putative.
   
 
 0.943
414.t00003
DEAD/DEAH box helicase, putative.
   
 
 0.784
370.t00004
Uncharacterized protein.
   
 
 0.730
436.t00002
Topoisomerase, putative.
   
 
 0.729
76.t00024
Density-regulated protein, putative.
   
 
 0.728
406.t00005
Topoisomerase, putative.
   
 
 0.727
91.t00009
Exosome complex exonuclease, putative.
   
 
 0.717
75.t00036
3' exoribonuclease family protein.
   
 
 0.681
16.t00038
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. May acquire specificity through interaction with a cleavage and polyadenylation factor.
      
 0.679
284.t00010
Importin, putative.
   
 
 0.619
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.