STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
48.t00006RNA-binding protein, putative. (255 aa)    
Predicted Functional Partners:
79.t00027
40S ribosomal protein S14, putative; Belongs to the universal ribosomal protein uS11 family.
   
 0.999
178.t00005
U3 small nucleolar ribonucleoprotein subunit, putative.
   
 0.999
13.t00048
Uncharacterized protein.
   
 0.999
2.t00040
WD domain containing protein.
   
 0.999
1.t00079
Uncharacterized protein.
   
 0.999
3.t00130
Ribosome biogenesis protein NEP1, putative.
  
 0.999
8.t00062
WD domain containing protein.
   
 0.999
15.t00009
Uncharacterized protein.
   
 0.999
85.t00004
WD domain containing protein.
   
 0.999
309.t00003
Nucleolar protein 10, putative.
   
 0.999
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.