STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
428.t00006Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
387.t00002
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.990
309.t00003
Nucleolar protein 10, putative.
   
 
 0.989
7.t00057
Uncharacterized protein.
   
 
 0.988
76.t00028
RNA-binding protein, putative.
   
 
 0.986
13.t00048
Uncharacterized protein.
   
 
 0.984
299.t00008
Ribosome biogenesis protein BMS1, putative.
   
 
 0.983
8.t00062
WD domain containing protein.
   
 
 0.982
1.t00047
WD repeat protein.
   
 
 0.982
14.t00016
Uncharacterized protein.
   
 
 0.979
307.t00003
Uncharacterized protein.
   
 
 0.979
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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