STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
37.t00038Retinoblatoma-binding protein 6, putative. (394 aa)    
Predicted Functional Partners:
77.t00007
WD domain containing protein.
   
 
 0.999
33.t00006
Cleavage and polyadenylation specificity factor 73 kDa subunit, putative.
   
 
 0.999
448.t00002
Cleavage and polyadenylation specificity factor subunit, putative.
   
 
 0.999
193.t00008
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.999
4.t00062
Zinc finger protein, putative.
   
 
 0.999
16.t00038
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. May acquire specificity through interaction with a cleavage and polyadenylation factor.
    
 
 0.993
309.t00007
Fip1 domain-containing protein.
    
 
 0.990
1.t00023
Uncharacterized protein.
    
 
 0.989
60.t00026
WD domain containing protein.
    
 
 0.989
39.t00057
RRM domain-containing protein.
   
 
 0.920
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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