STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
64.t00007RNA recognition motif domain containing protein. (414 aa)    
Predicted Functional Partners:
16.t00002
Pumilio domain-containing protein C6G9.14, putative.
    
 
 0.840
10.t00027
U1snRNP-specific protein, putative.
   
 0.763
31.t00025
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.746
48.t00017
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.731
243.t00007
Small nuclear ribonucleoprotein G.
   
 0.721
75.t00014
Small nuclear ribonucleoprotein F, putative.
   
 0.714
100.t00009
Nuclear cap-binding protein subunit 2.
    
 0.714
108.t00012
Splicing factor, arginine/serine-rich, putative.
  
 
0.709
74.t00043
Small nuclear ribonucleoprotein Sm D3.
   
 0.705
EHI_087430
SWIRM domain-containing protein.
   
 0.701
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
Server load: low (22%) [HD]