STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
20.t00015Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (315 aa)    
Predicted Functional Partners:
147.t00009
Deoxyribose-phosphate aldolase, putative.
 
 
 0.995
114.t00014
Ribose-phosphate pyrophosphokinase, putative.
  
 0.946
409.t00002
Phosphoglucomutase/phosphomannomutase family protein; Belongs to the phosphohexose mutase family.
  
 
 0.946
196.t00020
Transketolase, putative.
  
 0.946
382.t00004
Transketolase, putative.
  
 0.946
156.t00004
Ribose 5-phosphate isomerase, putative.
  
 
 0.946
17.t00052
Ribose-phosphate pyrophosphokinase, putative.
  
 0.945
PGM
Phosphoglucomutase, putative; Belongs to the phosphohexose mutase family.
   
 0.940
223.t00001
Fructose-1,6-bisphosphate aldolase, putative.
  
 
 0.925
42.t00042
Inosine-uridine preferring nucleoside hydrolase, putative.
  
 0.855
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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