STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
7.t00028Actin binding protein, putative. (775 aa)    
Predicted Functional Partners:
17.t00045
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.829
163.t00016
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.829
19.t00023
Zinc finger domain containing protein.
   
 0.785
23.t00064
Zinc finger domain containing protein.
    
 0.784
125.t00010
Zinc finger domain containing protein.
    
 0.784
200.t00017
Heat shock transcription factor, putative.
  
 
 0.734
74.t00002
Zinc finger domain containing protein.
   
 
 0.711
3.t00077
Cell division cycle protein 48, putative; Belongs to the AAA ATPase family.
  
 0.696
192.t00007
Cdc48-like protein, putative.
  
 0.694
32.t00028
AAA family ATPase, putative; Belongs to the AAA ATPase family.
  
 0.693
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.