STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
46.t00033Autophagy-related protein 3. (268 aa)    
Predicted Functional Partners:
81.t00009
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.999
337.t00002
Autophagy-related protein.
   
 0.999
65.t00026
Autophagy protein apg7, putative.
  
 0.999
258.t00007
Autophagy-related protein.
   
 0.999
191.t00004
WD domain containing protein.
   
 0.995
EHI_107780
WD domain containing protein.
   
 0.961
120.t00016
Protein kinase with WD repeats.
     
 0.952
48.t00032
Uncharacterized protein.
   
 0.946
8.t00080
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 
 0.897
9.t00057
Ankyrin repeat/GTPase-activator domain containing protein.
   
 
 0.849
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.