STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
68.t00026RNA recognition motif domain containing protein. (264 aa)    
Predicted Functional Partners:
215.t00011
Nucleolar phosphoprotein Nopp34, putative.
   
 
 0.962
517.t00001
DEAD/DEAH box helicase, putative; Belongs to the DEAD box helicase family.
   
 0.951
204.t00004
Uncharacterized protein.
   
 
 0.950
38.t00035
Pumilio family RNA-binding protein.
   
 
 0.942
297.t00009
Ccaat-box-binding transcription factor, putative.
   
 
 0.941
86.t00036
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.928
39.t00015
Proliferating-cell nucleolar antigen p120, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.925
9.t00076
Nucleolar complex protein 2 homolog, putative.
   
 
 0.921
15.t00016
rRNA processing protein, putative.
   
 
 0.920
16.t00022
Brix domain containing protein.
   
   0.911
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.